Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015831011.1_cds_XP_016504348.1_17802
CDS Infomation

[gene=LOC107822335] [db_xref=GeneID:107822335] [protein=paramyosin-like] [protein_id=XP_016504348.1] [location=join(151835..153232,153307..153383,153585..153696,153847..153963,161240..161593)] [gbkey=CDS]
Sequence

ATGGCGAGCGCCGGTGAGGAAGACAACGACGCTGTACTGAGCGACGTCGAGGCGGATGAT
CCGCTACCTATTGATATAAATTCTCCGCCACCGGAAGATGTCTCAATTGAGAAATTCCAT
GAGATTCTTGCGGAGCTGGATCGAGAGCGGCAAGCTCGATTAGCCGCAGAGAATTCTAAA
TCGGAATTGCAAGTTTCGTTTAACAGATTGAGAGTTCTCGCTCATGAAGCAATCAAAAAG
CGCGATGAGCACTCGAGACAACGCGATGAAGCATTACGGGAAAAGGAAGAAGTTTCTAGA
ACAGTCGAGAAGGTAACGGATGAACTAAAAGAAGCAATTAAGCAGAAAGATGATTTTGCT
AAGCAGTTAGAGGAAGTGAAAAAAGCTAAAGAATCAATGAGAACTGAGATGGAAACTTCT
GGTTCAATGTTAGTTAGTGGAATTGATAAAATATCTGGAAAAGTTAGTCAATTTAAGAAT
TTTGTAGATGGTGGATTACCTAGGTCACAGAAATACACAGGATTGCCAGCTGTCTCGTAT
GGCGTGATCAAACGGACGAATGAGATTGTAGAGGAGCTTTTAAGACATATTGAATCAACA
ACAAAGTCAAGGAACGAGGCACGGGAACAAATGGAACATAGGAATTATGAAATTGCTATT
GAAGTTTCAGAGTTAGAGGCAAAGATTAGTGGTTTGAGAGAGGAGGTTGCGAAGAAAGCT
TCAGTTGTCGACAGTTTAGAGAAATCTGTAAGTGAAAAGGATGAGAAACTATCGGAGTTG
GAAGGAGTGATGTGTGAGAAGCAAAATGCATTGGAGAGTGAAGTGGTTGGATTGAGGGAT
TTGGTGAGTGAATACGAGGGTAGGTTAAGCAGTTCAGAAACAAAGCTGGAAATGCAAAGA
CCATTACTTGCTGAGCAACTGAAATATGTTGGGAATATACACGGACAGATTTATAATGCT
GTTAAGGTTGTTGATGCGAGGAAGGCATCTGAGTTGTCGGAATCCTTGTTTCTTGCGCAA
GAGATGGACATGGAAGAGAATATAAGGGCAGTTTTAGCGGGATTGGAATCTATATATGAA
ATGAGTGAATTCGTTGTCCATAAAACGAGGGATTTGCTAGAGGAGAGGAGTCGTGAAGTG
AAAAACCTAAATGAGTCAGTTTCTCAGTTAGTAAAAGAAAAAGAACAAATTGGGTCTTTA
CTGAGAAGTGCTCTTTCAAAGAGAATTTCAGTGGATTTATCATCCAAAACAAATGAATTG
TTTAAGATAGCGGAAAATGGATTGAGAGAAGCTGGGATAAATTACAAGTTCAATAATCGT
GTTGGCGATGGCAAGATCCCTGCTTCTGATAATAAAAAGGATGCAGCGGATACAGAAGAG
GATGAAGTATATGCTTTGGCTGGTGCATTAGAAAATATAATTAGGCAGTCTCAGGTTGAG
ATCATTGACCTAAAACATACTGTGGAAGAACTAAGAGCAGAGTCAAGTTTATTGAAGGAA
CATGTGGAAACTCAAGTGAAGGAACTCAGTCAATGGAAGCAACGCGTGGAGGAACTTGAA
GAAAAGGAGAGGGTGGCAAATGAAAATGTTGAAGGGCTTATGATGGACATCACTGCCGCT
GAAGAAGAAATTACACGGTGGAAAGTCGCTGCACAGCAAGAAGCTGCTGCAGGTAAAGCT
GTTGAACAAGAGTGTGAGGCACAGTTGTCGGCTGTACGCCAGGAGCTTGAGGCAGCGAAG
GAGGCCGTACTAGAGTCTGAGAAGAAACTCAAATTCAAAGAAGAAACAGCTGATGCAGCC
ATGGCTGCAAGAGATGCAGCTGAGAAATCATTGAGACTGGCAGATTTAAGAGCATCGAGG
CTGAGGGATAAAGTGGAAGAGCTCACTCGTCAGCTGGAAGAGCTAGATGGCAGGGAAACA
TCCAGAACTGCTCTAAACAGGCCAAGATACATATGCTGGCCATGGCAATGGCTTGGCTTA
GATTTGGTAGGTACGAGACGTGTAGAGACACTACAAGAGAGTGCCAATGAAATGGAACTT
TCCGAACCCCTTCTTTGA

Peptide Sequence

PEP ID

XP_016504348.1
PEP Infomation

PREDICTED: paramyosin-like [Nicotiana tabacum]
Sequence

MASAGEEDNDAVLSDVEADDPLPIDINSPPPEDVSIEKFHEILAELDRERQARLAAENSK
SELQVSFNRLRVLAHEAIKKRDEHSRQRDEALREKEEVSRTVEKVTDELKEAIKQKDDFA
KQLEEVKKAKESMRTEMETSGSMLVSGIDKISGKVSQFKNFVDGGLPRSQKYTGLPAVSY
GVIKRTNEIVEELLRHIESTTKSRNEAREQMEHRNYEIAIEVSELEAKISGLREEVAKKA
SVVDSLEKSVSEKDEKLSELEGVMCEKQNALESEVVGLRDLVSEYEGRLSSSETKLEMQR
PLLAEQLKYVGNIHGQIYNAVKVVDARKASELSESLFLAQEMDMEENIRAVLAGLESIYE
MSEFVVHKTRDLLEERSREVKNLNESVSQLVKEKEQIGSLLRSALSKRISVDLSSKTNEL
FKIAENGLREAGINYKFNNRVGDGKIPASDNKKDAADTEEDEVYALAGALENIIRQSQVE
IIDLKHTVEELRAESSLLKEHVETQVKELSQWKQRVEELEEKERVANENVEGLMMDITAA
EEEITRWKVAAQQEAAAGKAVEQECEAQLSAVRQELEAAKEAVLESEKKLKFKEETADAA
MAARDAAEKSLRLADLRASRLRDKVEELTRQLEELDGRETSRTALNRPRYICWPWQWLGL
DLVGTRRVETLQESANEMELSEPLL

Transcript Sequence

Gene sequence data has not been registered.